=> Bootstrap dependency digest>=20010302: found digest-20190127
WARNING: [license.mk] Every package should define a LICENSE.
=> Checksum SHA1 OK for mpich-3.2.1.tar.gz
=> Checksum RMD160 OK for mpich-3.2.1.tar.gz
=> Checksum SHA512 OK for mpich-3.2.1.tar.gz
===> Installing dependencies for mpich-3.2.1nb4
==========================================================================
The supported build options for mpich are:

	debug f90

You can select which build options to use by setting PKG_DEFAULT_OPTIONS
or the following variable.  Its current value is shown:

	PKG_OPTIONS.mpich (not defined)

==========================================================================
=> Tool dependency libtool-base>=2.4.2nb9: found libtool-base-2.4.6nb2
=> Tool dependency bsdtar-[0-9]*: found bsdtar-3.4.3
=> Tool dependency checkperms>=1.1: found checkperms-1.12
=> Build dependency x11-links>=1.32: found x11-links-1.32
=> Build dependency cwrappers>=20150314: found cwrappers-20180325
=> Full dependency bash-[0-9]*: found bash-5.1.4
=> Full dependency perl>=5.0: found perl-5.32.1
=> Full dependency hwloc>=1.11.13nb2: found hwloc-1.11.13nb2
=> Full dependency openpa>=1.0.1: found openpa-1.0.4
===> Skipping vulnerability checks.
WARNING: No /var/db/pkg/pkg-vulnerabilities file found.
WARNING: To fix run: `/usr/sbin/pkg_admin -K /var/db/pkg fetch-pkg-vulnerabilities'.
===> Overriding tools for mpich-3.2.1nb4
===> Extracting for mpich-3.2.1nb4
===> Patching for mpich-3.2.1nb4
=> Applying pkgsrc patches for mpich-3.2.1nb4
=> Verifying /tree/pkgsrc/parallel/mpi-ch/patches/patch-Makefile.in
=> Applying pkgsrc patch /tree/pkgsrc/parallel/mpi-ch/patches/patch-Makefile.in
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-Makefile.in,v 1.4 2018/11/04 11:49:40 bsiegert Exp $
|
|Do not create libopa symlink; it conflicts with parallel/openpa/PLIST.
|
|--- Makefile.in.orig	2015-11-12 04:08:10.000000000 +0000
|+++ Makefile.in
--------------------------
Patching file Makefile.in using Plan A...
Hunk #1 succeeded at 39730 (offset -54 lines).
done
=> Verifying /tree/pkgsrc/parallel/mpi-ch/patches/patch-configure
=> Applying pkgsrc patch /tree/pkgsrc/parallel/mpi-ch/patches/patch-configure
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-configure,v 1.2 2017/04/29 18:18:52 adam Exp $
|
|Portability fix.
|Make it use weak symbols with Clang.
|
|--- configure.orig	2015-11-12 04:08:11.000000000 +0000
|+++ configure
--------------------------
Patching file configure using Plan A...
Hunk #1 succeeded at 26875 (offset 438 lines).
Hunk #2 succeeded at 28963 (offset -359 lines).
done
=> Verifying /tree/pkgsrc/parallel/mpi-ch/patches/patch-src_mpi_romio_configure
=> Applying pkgsrc patch /tree/pkgsrc/parallel/mpi-ch/patches/patch-src_mpi_romio_configure
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-src_mpi_romio_configure,v 1.1 2017/04/29 18:18:52 adam Exp $
|
|Portability fix.
|
|--- src/mpi/romio/configure.orig	2017-04-28 20:33:04.000000000 +0000
|+++ src/mpi/romio/configure
--------------------------
Patching file src/mpi/romio/configure using Plan A...
Hunk #1 succeeded at 22991 (offset 62 lines).
done
=> Verifying /tree/pkgsrc/parallel/mpi-ch/patches/patch-src_mpid_ch3_channels_nemesis_include_mpidi_ch3_impl.h
=> Applying pkgsrc patch /tree/pkgsrc/parallel/mpi-ch/patches/patch-src_mpid_ch3_channels_nemesis_include_mpidi_ch3_impl.h
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-src_mpid_ch3_channels_nemesis_include_mpidi_ch3_impl.h,v 1.2 2017/04/29 18:18:52 adam Exp $
|
|Use pthread_mutexattr_setpshared() only when available.
|
|--- src/mpid/ch3/channels/nemesis/include/mpidi_ch3_impl.h.orig	2015-11-10 02:39:01.000000000 +0000
|+++ src/mpid/ch3/channels/nemesis/include/mpidi_ch3_impl.h
--------------------------
Patching file src/mpid/ch3/channels/nemesis/include/mpidi_ch3_impl.h using Plan A...
Hunk #1 succeeded at 106.
Hunk #2 succeeded at 125.
done
=> Verifying /tree/pkgsrc/parallel/mpi-ch/patches/patch-src_mpid_ch3_channels_nemesis_src_ch3__init.c
=> Applying pkgsrc patch /tree/pkgsrc/parallel/mpi-ch/patches/patch-src_mpid_ch3_channels_nemesis_src_ch3__init.c
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-src_mpid_ch3_channels_nemesis_src_ch3__init.c,v 1.1 2017/04/29 18:18:52 adam Exp $
|
|Use pthread_mutexattr_setpshared() only when available.
|
|--- src/mpid/ch3/channels/nemesis/src/ch3_init.c.orig	2017-04-29 16:30:18.534262462 +0000
|+++ src/mpid/ch3/channels/nemesis/src/ch3_init.c
--------------------------
Patching file src/mpid/ch3/channels/nemesis/src/ch3_init.c using Plan A...
Hunk #1 succeeded at 52.
Hunk #2 succeeded at 64.
done
=> Verifying /tree/pkgsrc/parallel/mpi-ch/patches/patch-src_pm_hydra_configure
=> Applying pkgsrc patch /tree/pkgsrc/parallel/mpi-ch/patches/patch-src_pm_hydra_configure
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-src_pm_hydra_configure,v 1.3 2017/04/29 18:18:52 adam Exp $
|
|Last newline is not needed.
|
|--- src/pm/hydra/configure.orig	2012-12-20 21:28:12.000000000 +0100
|+++ src/pm/hydra/configure	2013-01-24 15:36:08.260189221 +0100
--------------------------
Patching file src/pm/hydra/configure using Plan A...
Hunk #1 succeeded at 14604 (offset 231 lines).
done
===> Creating toolchain wrappers for mpich-3.2.1nb4
===> Configuring for mpich-3.2.1nb4
=> Modifying GNU configure scripts to avoid --recheck
=> Replacing config-guess with pkgsrc versions
=> Replacing config-sub with pkgsrc versions
=> Replacing install-sh with pkgsrc version
=> Checking for portability problems in extracted files
configure: WARNING: unrecognized options: --with-hwloc-prefix
Configuring MPICH version 3.2.1 with  '--datadir=/usr/pkg/share/mpich' '--docdir=/usr/pkg/share/doc/mpich' '--htmldir=/usr/pkg/share/doc/mpich/html' '--sysconfdir=/usr/pkg/etc/mpich' '--with-hwloc-prefix=/usr/pkg' '--with-openpa-prefix=/usr/pkg' '--with-pm=hydra:gforker' '--with-thread-package=posix' '--enable-wrapper-rpath' '--enable-fortran=no' '--x-includes=/usr/X11R7/include' '--x-libraries=/usr/X11R7/lib' '--prefix=/usr/pkg' '--build=armv7--netbsdelf-eabihf' '--host=armv7--netbsdelf-eabihf' '--mandir=/usr/pkg/man' '--enable-option-checking=yes' 'build_alias=armv7--netbsdelf-eabihf' 'host_alias=armv7--netbsdelf-eabihf' 'CC=gcc' 'CFLAGS=-O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/X11R7/include -I/usr/include' 'LDFLAGS=-lm -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/X11R7/lib -Wl,-R/usr/X11R7/lib -L/usr/lib -Wl,-R/usr/lib' 'LIBS=' 'CPPFLAGS=-I/usr/pkg/include -I/usr/X11R7/include -I/usr/include' 'CXX=c++' 'CXXFLAGS=-O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/X11R7/include -I/usr/include' 'FC=g77' 'F77=g77' 'FFLAGS=-O'
Running on system: NetBSD armbulk2 8.0 NetBSD 8.0 (LIBKVER) #0: Tue Jan 19 00:00:00 UTC 2038 root@localhost:/sys/arch/evbarm/compile/LIBKVER evbarm
checking for armv7--netbsdelf-eabihf-icc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking how to run the C preprocessor... gcc -E
checking for a BSD-compatible install... /usr/bin/install -c -o pbulk -g users
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... confdb/install-sh -c -d
checking for gawk... /usr/bin/awk
checking whether make sets $(MAKE)... yes
checking for style of include used by make... GNU
checking whether make supports nested variables... yes
checking dependency style of gcc... gcc3
checking whether to enable maintainer-specific portions of Makefiles... yes
checking for armv7--netbsdelf-eabihf-ar... no
checking for armv7--netbsdelf-eabihf-lib... no
checking for armv7--netbsdelf-eabihf-link... no
checking for ar... ar
checking the archiver (ar) interface... ar
checking build system type... armv7--netbsdelf-eabihf
checking host system type... armv7--netbsdelf-eabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/egrep
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld
checking if the linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... (cached) 262144
checking how to convert armv7--netbsdelf-eabihf file names to armv7--netbsdelf-eabihf format... func_convert_file_noop
checking how to convert armv7--netbsdelf-eabihf file names to toolchain format... func_convert_file_noop
checking for /scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld option to reload object files... -r
checking for armv7--netbsdelf-eabihf-objdump... no
checking for objdump... objdump
checking how to recognize dependent libraries... match_pattern /lib[^/]+(\.so|_pic\.a)$
checking for armv7--netbsdelf-eabihf-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for armv7--netbsdelf-eabihf-ar... ar
checking for archiver @FILE support... @
checking for armv7--netbsdelf-eabihf-strip... no
checking for strip... strip
checking for armv7--netbsdelf-eabihf-ranlib... no
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for armv7--netbsdelf-eabihf-mt... no
checking for mt... mt
checking if mt is a manifest tool... no
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... rm: conftest*: No such file or directory
yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... rm: conftest*: No such file or directory
no
checking dynamic linker characteristics... NetBSD ld.elf_so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether make supports nested variables... (cached) yes
checking whether we are using the GNU C++ compiler... yes
checking whether c++ accepts -g... yes
checking dependency style of c++... gcc3
checking how to run the C++ preprocessor... c++ -E
checking for ld used by c++... /scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld
checking if the linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) is GNU ld... yes
checking whether the c++ linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) supports shared libraries... yes
checking for c++ option to produce PIC... -fPIC -DPIC
checking if c++ PIC flag -fPIC -DPIC works... yes
checking if c++ static flag -static works... yes
checking if c++ supports -c -o file.o... rm: conftest*: No such file or directory
yes
checking if c++ supports -c -o file.o... (cached) yes
checking whether the c++ linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... NetBSD ld.elf_so
checking how to hardcode library paths into programs... immediate
checking for armv7--netbsdelf-eabihf-ifort... g77
checking whether we are using the GNU Fortran compiler... no
checking whether g77 accepts -g... no
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
libtool.m4: error: problem compiling FC test program
checking for g77 option to produce PIC... 
checking if g77 static flag  works... no
checking if g77 supports -c -o file.o... rm: conftest*: No such file or directory
no
checking if g77 supports -c -o file.o... (cached) no
checking whether the g77 linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) supports shared libraries... PKGSRC-WARNING: Something is trying to run the fortran compiler,
PKGSRC-WARNING: but it is not added to USE_LANGUAGES in the package Makefile.
yes
checking dynamic linker characteristics... PKGSRC-WARNING: Something is trying to run the fortran compiler,
PKGSRC-WARNING: but it is not added to USE_LANGUAGES in the package Makefile.
NetBSD ld.elf_so
checking how to hardcode library paths into programs... immediate
checking for armv7--netbsdelf-eabihf-ifort... g77
checking whether we are using the GNU Fortran 77 compiler... no
checking whether g77 accepts -g... no
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for g77 option to produce PIC... 
checking if g77 static flag  works... no
checking if g77 supports -c -o file.o... rm: conftest*: No such file or directory
no
checking if g77 supports -c -o file.o... (cached) no
checking whether the g77 linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) supports shared libraries... PKGSRC-WARNING: Something is trying to run the fortran compiler,
PKGSRC-WARNING: but it is not added to USE_LANGUAGES in the package Makefile.
yes
checking dynamic linker characteristics... PKGSRC-WARNING: Something is trying to run the fortran compiler,
PKGSRC-WARNING: but it is not added to USE_LANGUAGES in the package Makefile.
NetBSD ld.elf_so
checking how to hardcode library paths into programs... immediate
configure: RUNNING PREREQ FOR ch3:nemesis
checking hcoll/api/hcoll_api.h usability... no
checking hcoll/api/hcoll_api.h presence... no
checking for hcoll/api/hcoll_api.h... no
checking for hcoll_init in -lhcoll... no
configure: ===== configuring src/mpl =====
configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/pkg' --disable-versioning '--datadir=/usr/pkg/share/mpich' '--docdir=/usr/pkg/share/doc/mpich' '--htmldir=/usr/pkg/share/doc/mpich/html' '--sysconfdir=/usr/pkg/etc/mpich' '--with-hwloc-prefix=/usr/pkg' '--with-openpa-prefix=/usr/pkg' '--with-pm=hydra:gforker' '--with-thread-package=posix' '--enable-wrapper-rpath' '--enable-fortran=no' '--x-includes=/usr/X11R7/include' '--x-libraries=/usr/X11R7/lib' '--build=armv7--netbsdelf-eabihf' '--host=armv7--netbsdelf-eabihf' '--mandir=/usr/pkg/man' '--enable-option-checking=yes' 'build_alias=armv7--netbsdelf-eabihf' 'host_alias=armv7--netbsdelf-eabihf' 'CC=gcc' 'CFLAGS=-O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/X11R7/include -I/usr/include  ' 'LDFLAGS=-lm -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/X11R7/lib -Wl,-R/usr/X11R7/lib -L/usr/lib -Wl,-R/usr/lib' 'LIBS=' 'CPPFLAGS=-I/usr/pkg/include -I/usr/X11R7/include -I/usr/include ' 'CXX=c++' 'CXXFLAGS=-O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/X11R7/include -I/usr/include ' 'FC=g77' 'F77=g77' 'FFLAGS=-O ' --cache-file=/dev/null --srcdir=.
configure: WARNING: unrecognized options: --with-hwloc-prefix, --with-openpa-prefix, --with-pm, --with-thread-package, --enable-wrapper-rpath, --enable-fortran
checking for a BSD-compatible install... /usr/bin/install -c -o pbulk -g users
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... confdb/install-sh -c -d
checking for gawk... /usr/bin/awk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for style of include used by make... GNU
checking for armv7--netbsdelf-eabihf-icc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking for armv7--netbsdelf-eabihf-ar... ar
checking the archiver (ar) interface... ar
checking build system type... armv7--netbsdelf-eabihf
checking host system type... armv7--netbsdelf-eabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/egrep
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld
checking if the linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... (cached) 262144
checking how to convert armv7--netbsdelf-eabihf file names to armv7--netbsdelf-eabihf format... func_convert_file_noop
checking how to convert armv7--netbsdelf-eabihf file names to toolchain format... func_convert_file_noop
checking for /scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld option to reload object files... -r
checking for armv7--netbsdelf-eabihf-objdump... no
checking for objdump... objdump
checking how to recognize dependent libraries... match_pattern /lib[^/]+(\.so|_pic\.a)$
checking for armv7--netbsdelf-eabihf-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for armv7--netbsdelf-eabihf-ar... (cached) ar
checking for archiver @FILE support... @
checking for armv7--netbsdelf-eabihf-strip... no
checking for strip... strip
checking for armv7--netbsdelf-eabihf-ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for armv7--netbsdelf-eabihf-mt... no
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... rm: conftest*: No such file or directory
yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... rm: conftest*: No such file or directory
no
checking dynamic linker characteristics... NetBSD ld.elf_so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether make supports nested variables... (cached) yes
checking for an ANSI C-conforming const... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking for variable argument list macro functionality... yes
checking for gcov... gcov
checking whether the compiler supports __typeof(variable)... yes
checking stdio.h usability... yes
checking stdio.h presence... yes
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checking sys/uio.h presence... yes
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checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating localdefs
config.status: creating include/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
rm: libtoolT: No such file or directory
config.status: executing include/mplconfig.h commands
config.status: creating include/mplconfig.h - prefix MPL for include/config.h defines
configure: WARNING: unrecognized options: --with-hwloc-prefix, --with-openpa-prefix, --with-pm, --with-thread-package, --enable-wrapper-rpath, --enable-fortran
configure: ===== done with src/mpl configure =====
configure: sourcing src/mpl/localdefs
sourcing /scratch/work/parallel/mpi-ch/work/mpich-3.2.1/src/pm/hydra/mpichprereq
checking whether the compiler defines __func__... yes
checking whether the compiler defines __FUNC__... no
checking whether the compiler sets __FUNCTION__... yes
checking whether C compiler accepts option -O2... yes
checking whether C compiler option -O2 works with an invalid prototype program... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking for type of weak symbol alias support... pragma weak
checking whether __attribute__ ((weak)) allowed... yes
checking whether __attribute__ ((weak_import)) allowed... yes
checking whether __attribute__((weak,alias(...))) allowed... yes
checking for multiple weak symbol support... yes
checking for shared library (esp. rpath) characteristics of CC... done (results in src/env/cc_shlib.conf)
checking whether TRUE has been defined... no
checking whether the C++ compiler c++ can build an executable... yes
checking whether C++ compiler works with string... yes
checking whether the compiler supports exceptions... yes
checking whether the compiler recognizes bool as a built-in type... yes
checking whether the compiler implements namespaces... yes
checking whether <iostream> available... yes
checking whether the compiler implements the namespace std... yes
checking whether <math> available... no
checking for GNU g++ version... 5 . 5
checking for shared library (esp. rpath) characteristics of CXX... done (results in src/env/cxx_shlib.conf)
checking whether C++ compiler accepts option -O2... yes
checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
checking for perl... /usr/pkg/bin/perl
checking for ar... (cached) ar
checking for ranlib... ranlib
checking for killall... no
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checking for virtual path format... VPATH
checking whether make sets CFLAGS... yes
checking for bash... /usr/pkg/bin/bash
checking whether /usr/pkg/bin/bash supports arrays... yes
checking for doctext... false
checking for an ANSI C-conforming const... yes
checking for working volatile... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking whether __attribute__ allowed... yes
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checking if C compiler supports __builtin_expect... yes
checking whether byte ordering is bigendian... no
checking whether C compiler allows unaligned doubles... yes
checking whether gcc supports __func__... yes
checking whether long double is supported... yes
checking whether long long is supported... yes
checking for max C struct integer alignment... eight
checking for max C struct floating point alignment... sixteen
checking for max C struct alignment of structs with doubles... eight
checking for max C struct floating point alignment with long doubles... sixteen
configure: WARNING: Structures containing long doubles may be aligned differently from structures with floats or longs.  MPICH does not handle this case automatically and you should avoid assumed extents for structures containing float types.
checking if alignment of structs with doubles is based on position... no
checking if alignment of structs with long long ints is based on position... no
checking if double alignment breaks rules, find actual alignment... no
checking for alignment restrictions on pointers... int or better
checking size of char... 1
checking size of unsigned char... 1
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checking size of unsigned short... 2
checking size of int... 4
checking size of unsigned int... 4
checking size of long... 4
checking size of unsigned long... 4
checking size of long long... 8
checking size of unsigned long long... 8
checking size of float... 4
checking size of double... 8
checking size of long double... 8
checking size of void *... 4
checking for ANSI C header files... (cached) yes
checking stddef.h usability... yes
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checking size of wchar_t... 4
checking size of float_int... 8
checking size of double_int... 16
checking size of long_int... 8
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checking size of two_int... 8
checking size of long_double_int... 16
checking sys/bitypes.h usability... no
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checking size of _Bool... 1
checking size of float _Complex... 8
checking size of double _Complex... 16
checking size of long double _Complex... 16
checking for _Bool... yes
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checking for double _Complex... yes
checking for long double _Complex... yes
checking size of bool... 1
checking complex usability... yes
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checking for complex... yes
checking size of Complex... 8
checking size of DoubleComplex... 16
checking size of LongDoubleComplex... 16
checking for alignment restrictions on int64_t... no
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checking for gcov... gcov
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checking for alloca... yes
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checking whether struct timespec is defined in time.h... yes
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checking size of MPIR_Bsend_data_t... 56
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checking whether pthread_cleanup_push is available (may be a macro in pthread.h)... no
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checking whether pthread_mutexattr_settype needs a declaration... no
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checking for library containing socket... none required
checking for library containing gethostbyname... none required
checking for socket... yes
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configure: RUNNING CONFIGURE FOR CH3 DEVICE
checking for assert.h... (cached) yes
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checking for CFUUIDCreate... no
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checking whether byte ordering is bigendian... (cached) no
configure: RUNNING CONFIGURE FOR ch3:nemesis
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checking signal.h presence... yes
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checking for signal... yes
checking for mkstemp... (cached) yes
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configure: Using a memory-mapped file for shared memory
checking whether struct hostent contains h_addr_list... (cached) yes
checking whether we can use struct ifconf... yes
checking whether we can use struct ifreq... yes
checking knem_io.h usability... no
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checking for knem_io.h... no
configure: RUNNING CONFIGURE FOR src/pm/gforker
checking for library containing socketpair... none required
checking for sys/types.h... (cached) yes
checking for signal.h... (cached) yes
checking sys/ptrace.h usability... yes
checking sys/ptrace.h presence... yes
checking for sys/ptrace.h... yes
checking for strsignal... yes
checking for sigaction... yes
checking for signal... (cached) yes
checking for sigset... yes
checking for struct sigaction... yes
checking for string.h... (cached) yes
checking for sys/time.h... (cached) yes
checking for unistd.h... (cached) yes
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checking for sys/socket.h... (cached) yes
checking wait.h usability... no
checking wait.h presence... no
checking for wait.h... no
checking for errno.h... (cached) yes
configure: RUNNING CONFIGURE FOR src/pm/util
checking for pid_t... (cached) yes
checking for setsid... yes
checking for isatty... yes
checking for getsid... yes
checking whether getsid needs a declaration... no
checking for unsetenv... yes
checking for cygwin1.dll in /bin... yes
checking for environ in unistd.h... no
checking for extern environ in runtime... yes
checking for library containing socketpair... (cached) none required
checking for ANSI C header files... (cached) yes
checking for sys/types.h... (cached) yes
checking for signal.h... (cached) yes
checking for sys/ptrace.h... (cached) yes
checking for sys/uio.h... (cached) yes
checking for unistd.h... (cached) yes
checking whether struct iovec is defined in sys/uio.h... yes
checking for strsignal... (cached) yes
checking whether strsignal needs a declaration... no
checking for snprintf... (cached) yes
checking for strdup... (cached) yes
checking for sigaction... (cached) yes
checking for signal... (cached) yes
checking for sigset... (cached) yes
checking for struct sigaction and sa_handler... yes
checking whether snprintf needs a declaration... (cached) no
checking whether strdup needs a declaration... (cached) no
checking for putenv... (cached) yes
checking whether putenv needs a declaration... (cached) no
checking for gethostname... (cached) yes
checking whether gethostname needs a declaration... (cached) no
checking for select... (cached) yes
checking for sys/select.h... (cached) yes
checking whether FD_ZERO works... yes
checking for sched_setaffinity... (cached) no
checking for sched_getaffinity... (cached) no
checking for bindprocessor... (cached) no
checking for thread_policy_set... (cached) no
checking for string.h... (cached) yes
checking for sys/time.h... (cached) yes
checking for time.h... (cached) yes
checking for stdlib.h... (cached) yes
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checking for wait.h... (cached) no
checking for errno.h... (cached) yes
checking for time... (cached) yes
checking whether socklen_t is defined (in sys/socket.h if present)... (cached) yes
configure: ===== configuring src/mpi/romio =====
configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/pkg'  '--datadir=/usr/pkg/share/mpich' '--docdir=/usr/pkg/share/doc/mpich' '--htmldir=/usr/pkg/share/doc/mpich/html' '--sysconfdir=/usr/pkg/etc/mpich' '--with-hwloc-prefix=/usr/pkg' '--with-openpa-prefix=/usr/pkg' '--with-pm=hydra:gforker' '--with-thread-package=posix' '--enable-wrapper-rpath' '--enable-fortran=no' '--x-includes=/usr/X11R7/include' '--x-libraries=/usr/X11R7/lib' '--build=armv7--netbsdelf-eabihf' '--host=armv7--netbsdelf-eabihf' '--mandir=/usr/pkg/man' '--enable-option-checking=yes' 'build_alias=armv7--netbsdelf-eabihf' 'host_alias=armv7--netbsdelf-eabihf' 'CC=gcc' 'CFLAGS=-O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/X11R7/include -I/usr/include   -O2' 'LDFLAGS=-lm -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/X11R7/lib -Wl,-R/usr/X11R7/lib -L/usr/lib -Wl,-R/usr/lib' 'LIBS=-lpthread ' 'CPPFLAGS=-I/usr/pkg/include -I/usr/X11R7/include -I/usr/include  -I/scratch/work/parallel/mpi-ch/work/mpich-3.2.1/src/mpl/include -I/scratch/work/parallel/mpi-ch/work/mpich-3.2.1/src/mpl/include -I/usr/pkg/include -D_REENTRANT -I/scratch/work/parallel/mpi-ch/work/mpich-3.2.1/src/mpi/romio/include' 'CXX=c++' 'CXXFLAGS=-O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/X11R7/include -I/usr/include  -O2' 'FC=g77' 'F77=g77' 'FFLAGS=-O ' --cache-file=/dev/null --srcdir=.
configure: WARNING: unrecognized options: --with-hwloc-prefix, --with-openpa-prefix, --with-pm, --with-thread-package, --enable-wrapper-rpath, --enable-fortran
checking for a BSD-compatible install... /usr/bin/install -c -o pbulk -g users
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... mkdir -p
checking for gawk... /usr/bin/awk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... yes
checking for style of include used by make... GNU
checking for armv7--netbsdelf-eabihf-icc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking for armv7--netbsdelf-eabihf-ar... ar
checking the archiver (ar) interface... ar
checking build system type... armv7--netbsdelf-eabihf
checking host system type... armv7--netbsdelf-eabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/egrep
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld
checking if the linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... (cached) 262144
checking how to convert armv7--netbsdelf-eabihf file names to armv7--netbsdelf-eabihf format... func_convert_file_noop
checking how to convert armv7--netbsdelf-eabihf file names to toolchain format... func_convert_file_noop
checking for /scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld option to reload object files... -r
checking for armv7--netbsdelf-eabihf-objdump... no
checking for objdump... objdump
checking how to recognize dependent libraries... match_pattern /lib[^/]+(\.so|_pic\.a)$
checking for armv7--netbsdelf-eabihf-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for armv7--netbsdelf-eabihf-ar... (cached) ar
checking for archiver @FILE support... @
checking for armv7--netbsdelf-eabihf-strip... no
checking for strip... strip
checking for armv7--netbsdelf-eabihf-ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for armv7--netbsdelf-eabihf-mt... no
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... rm: conftest*: No such file or directory
yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... rm: conftest*: No such file or directory
no
checking dynamic linker characteristics... NetBSD ld.elf_so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether make supports nested variables... (cached) yes
Configuring with args dummy mt
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... yes
checking for architecture... netbsd
ROMIO home directory is /scratch/work/parallel/mpi-ch/work/mpich-3.2.1/src/mpi/romio
checking for armv7--netbsdelf-eabihf-ifort... g77
checking whether we are using the GNU Fortran 77 compiler... no
checking whether g77 accepts -g... no
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for g77 option to produce PIC... 
checking if g77 static flag  works... no
checking if g77 supports -c -o file.o... rm: conftest*: No such file or directory
no
checking if g77 supports -c -o file.o... (cached) no
checking whether the g77 linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) supports shared libraries... PKGSRC-WARNING: Something is trying to run the fortran compiler,
PKGSRC-WARNING: but it is not added to USE_LANGUAGES in the package Makefile.
yes
checking dynamic linker characteristics... PKGSRC-WARNING: Something is trying to run the fortran compiler,
PKGSRC-WARNING: but it is not added to USE_LANGUAGES in the package Makefile.
NetBSD ld.elf_so
checking how to hardcode library paths into programs... immediate
checking for armv7--netbsdelf-eabihf-ifort... g77
checking whether we are using the GNU Fortran compiler... no
checking whether g77 accepts -g... no
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
libtool.m4: error: problem compiling FC test program
checking for g77 option to produce PIC... 
checking if g77 static flag  works... no
checking if g77 supports -c -o file.o... rm: conftest*: No such file or directory
no
checking if g77 supports -c -o file.o... (cached) no
checking whether the g77 linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) supports shared libraries... PKGSRC-WARNING: Something is trying to run the fortran compiler,
PKGSRC-WARNING: but it is not added to USE_LANGUAGES in the package Makefile.
yes
checking dynamic linker characteristics... PKGSRC-WARNING: Something is trying to run the fortran compiler,
PKGSRC-WARNING: but it is not added to USE_LANGUAGES in the package Makefile.
NetBSD ld.elf_so
checking how to hardcode library paths into programs... immediate
checking for long long... yes
checking size of long long... 8
checking for memalign... no
checking Fortran external names
configure: WARNING: Unable to test Fortran compiler.  Compiling a test
program failed to produce an object file
checking for inline... inline
checking for size_t... yes
checking for ssize_t... yes
checking for off_t... yes
checking how to run the C preprocessor... gcc -E
checking for unistd.h... (cached) yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking malloc.h usability... yes
checking malloc.h presence... yes
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checking stddef.h usability... yes
checking stddef.h presence... yes
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checking for sys/types.h... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking time.h usability... yes
checking time.h presence... yes
checking for time.h... yes
checking for mpix.h... no
checking for u_char... yes
checking for u_short... yes
checking for u_int... yes
checking for u_long... yes
checking sys/attr.h usability... no
checking sys/attr.h presence... no
checking for sys/attr.h... no
checking size of int... 4
checking size of void *... 4
checking for int large enough for pointers... yes
checking size of long long... (cached) 8
Overriding Array test for MPICH
checking for type of weak symbol alias support... pragma weak
checking whether __attribute__ ((weak)) allowed... yes
checking whether __attribute__ ((weak_import)) allowed... yes
checking whether __attribute__((weak,alias(...))) allowed... yes
checking for multiple weak symbol support... yes
checking whether struct flock compatible with MPI_Offset... yes
checking for pvfs2-config... notfound
checking configured file systems... testfs ufs nfs
configure: WARNING: File locks may not work with NFS.  See the Installation and
users manual for instructions on testing and if necessary fixing this
checking for library containing aio_write... -lrt
checking signal.h usability... yes
checking signal.h presence... yes
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checking aio.h usability... yes
checking aio.h presence... yes
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checking sys/aio.h usability... yes
checking sys/aio.h presence... yes
checking for sys/aio.h... yes
checking whether aio routines can be used... yes
checking for obsolete two-argument aio_write... no
checking for obsolete two-argument aio_suspend... no
checking for struct aiocb.aio_fildes... yes
checking for struct aiocb.aio_whence... no
checking for struct aiocb.aio_handle... no
checking for struct aiocb.aio_reqprio... yes
checking for struct aiocb.aio_sigevent... yes
checking sys/vfs.h usability... no
checking sys/vfs.h presence... no
checking for sys/vfs.h... no
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/mount.h usability... yes
checking sys/mount.h presence... yes
checking for sys/mount.h... yes
checking sys/statvfs.h usability... yes
checking sys/statvfs.h presence... yes
checking for sys/statvfs.h... yes
checking for statfs... yes
checking whether struct statfs properly defined... no
checking for f_fstypename member of statfs structure... no
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checking for unistd.h... (cached) yes
checking for stat... yes
checking for st_fstype member of stat structure... no
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checking for sys/vfs.h... (cached) no
checking for statvfs... yes
checking for f_basetype member of statvfs structure... no
checking for blksize_t... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking whether pwrite is declared... yes
checking for strerror... yes
checking for doctext... false
checking for strdup... yes
checking whether strdup needs a declaration... no
checking for snprintf... yes
checking whether snprintf needs a declaration... no
checking for lstat... yes
checking whether lstat needs a declaration... no
checking for readlink... yes
checking whether readlink needs a declaration... no
checking for fsync... yes
checking whether fsync needs a declaration... no
checking for ftruncate... yes
checking whether ftruncate needs a declaration... no
checking for lseek64... no
checking for usleep... yes
checking whether usleep needs a declaration... no
setting SYSDEP_INC to 
checking for C/C++ restrict keyword... __restrict
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking for gcov... gcov
setting CC to gcc
setting F77 to :
setting TEST_CC to $(bindir)/mpicc
setting TEST_F77 to $(bindir)/mpifort
setting CFLAGS to -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/X11R7/include -I/usr/include   -O2  -DHAVE_ROMIOCONF_H
setting USER_CFLAGS to 
setting USER_FFLAGS to 
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating localdefs
config.status: creating mpi2-other/info/Makefile
config.status: creating mpi2-other/array/Makefile
config.status: creating test/Makefile
config.status: creating test/misc.c
config.status: creating test/large_file.c
config.status: creating test/runtests
config.status: creating test-internal/Makefile
config.status: creating util/romioinstall
config.status: creating include/mpio.h
config.status: creating include/mpiof.h
config.status: creating mpi2-other/info/fortran/Makefile
config.status: creating mpi2-other/array/fortran/Makefile
config.status: creating test/fmisc.f
config.status: creating test/fcoll_test.f
config.status: creating test/pfcoll_test.f
config.status: creating test/fperf.f
config.status: creating adio/include/romioconf.h
config.status: executing depfiles commands
config.status: executing libtool commands
rm: libtoolT: No such file or directory
config.status: executing default-1 commands
configure: WARNING: unrecognized options: --with-hwloc-prefix, --with-openpa-prefix, --with-pm, --with-thread-package, --enable-wrapper-rpath, --enable-fortran
configure: ===== done with src/mpi/romio configure =====
configure: sourcing src/mpi/romio/localdefs
configure: ===== configuring src/pm/hydra =====
configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/pkg'  '--datadir=/usr/pkg/share/mpich' '--docdir=/usr/pkg/share/doc/mpich' '--htmldir=/usr/pkg/share/doc/mpich/html' '--sysconfdir=/usr/pkg/etc/mpich' '--with-hwloc-prefix=/usr/pkg' '--with-openpa-prefix=/usr/pkg' '--with-pm=hydra:gforker' '--with-thread-package=posix' '--enable-wrapper-rpath' '--enable-fortran=no' '--x-includes=/usr/X11R7/include' '--x-libraries=/usr/X11R7/lib' '--build=armv7--netbsdelf-eabihf' '--host=armv7--netbsdelf-eabihf' '--mandir=/usr/pkg/man' '--enable-option-checking=yes' 'build_alias=armv7--netbsdelf-eabihf' 'host_alias=armv7--netbsdelf-eabihf' 'CC=gcc' 'CFLAGS=-O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/X11R7/include -I/usr/include   -O2' 'LDFLAGS=-lm -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/X11R7/lib -Wl,-R/usr/X11R7/lib -L/usr/lib -Wl,-R/usr/lib' 'LIBS=-lpthread ' 'CPPFLAGS=-I/usr/pkg/include -I/usr/X11R7/include -I/usr/include  -I/scratch/work/parallel/mpi-ch/work/mpich-3.2.1/src/mpl/include -I/scratch/work/parallel/mpi-ch/work/mpich-3.2.1/src/mpl/include -I/usr/pkg/include -D_REENTRANT -I/scratch/work/parallel/mpi-ch/work/mpich-3.2.1/src/mpi/romio/include' 'CXX=c++' 'CXXFLAGS=-O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/X11R7/include -I/usr/include  -O2' 'FC=g77' 'F77=g77' 'FFLAGS=-O ' --cache-file=/dev/null --srcdir=.
configure: WARNING: unrecognized options: --with-openpa-prefix, --with-pm, --with-thread-package, --enable-wrapper-rpath, --enable-fortran
checking build system type... armv7--netbsdelf-eabihf
checking host system type... armv7--netbsdelf-eabihf
checking target system type... armv7--netbsdelf-eabihf
checking for armv7--netbsdelf-eabihf-icc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/egrep
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking for fgrep... /usr/bin/grep -F
checking for a BSD-compatible install... /usr/bin/install -c -o pbulk -g users
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... mkdir -p
checking for gawk... /usr/bin/awk
checking whether make sets $(MAKE)... yes
checking for style of include used by make... GNU
checking whether make supports nested variables... yes
checking dependency style of gcc... gcc3
checking for armv7--netbsdelf-eabihf-ar... ar
checking the archiver (ar) interface... ar
checking whether make supports nested variables... (cached) yes
checking for perl... /usr/pkg/bin/perl
checking for doctext... false
checking for an ANSI C-conforming const... yes
checking for working volatile... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking size of unsigned long... 4
checking for size_t... yes
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for ld used by gcc... /scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld
checking if the linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... (cached) 262144
checking how to convert armv7--netbsdelf-eabihf file names to armv7--netbsdelf-eabihf format... func_convert_file_noop
checking how to convert armv7--netbsdelf-eabihf file names to toolchain format... func_convert_file_noop
checking for /scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld option to reload object files... -r
checking for armv7--netbsdelf-eabihf-objdump... no
checking for objdump... objdump
checking how to recognize dependent libraries... match_pattern /lib[^/]+(\.so|_pic\.a)$
checking for armv7--netbsdelf-eabihf-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for armv7--netbsdelf-eabihf-ar... (cached) ar
checking for archiver @FILE support... @
checking for armv7--netbsdelf-eabihf-strip... no
checking for strip... strip
checking for armv7--netbsdelf-eabihf-ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for armv7--netbsdelf-eabihf-mt... no
checking for mt... mt
checking if mt is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... rm: conftest*: No such file or directory
yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... rm: conftest*: No such file or directory
no
checking dynamic linker characteristics... NetBSD ld.elf_so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for variable argument list macro functionality... yes
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking whether the compiler defines __func__... yes
checking whether the compiler defines __FUNC__... no
checking whether the compiler sets __FUNCTION__... yes
configure: ===== configuring mpl =====
configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/pkg' --disable-versioning '--datadir=/usr/pkg/share/mpich' '--docdir=/usr/pkg/share/doc/mpich' '--htmldir=/usr/pkg/share/doc/mpich/html' '--sysconfdir=/usr/pkg/etc/mpich' '--with-hwloc-prefix=/usr/pkg' '--with-openpa-prefix=/usr/pkg' '--with-pm=hydra:gforker' '--with-thread-package=posix' '--enable-wrapper-rpath' '--enable-fortran=no' '--x-includes=/usr/X11R7/include' '--x-libraries=/usr/X11R7/lib' '--build=armv7--netbsdelf-eabihf' '--host=armv7--netbsdelf-eabihf' '--mandir=/usr/pkg/man' '--enable-option-checking=yes' 'build_alias=armv7--netbsdelf-eabihf' 'host_alias=armv7--netbsdelf-eabihf' 'CC=gcc' 'CFLAGS=-O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/X11R7/include -I/usr/include   -O2 ' 'LDFLAGS=-lm -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/X11R7/lib -Wl,-R/usr/X11R7/lib -L/usr/lib -Wl,-R/usr/lib' 'LIBS=' 'CPPFLAGS=-I/usr/pkg/include -I/usr/X11R7/include -I/usr/include  -I/scratch/work/parallel/mpi-ch/work/mpich-3.2.1/src/mpl/include -I/scratch/work/parallel/mpi-ch/work/mpich-3.2.1/src/mpl/include -I/usr/pkg/include -D_REENTRANT -I/scratch/work/parallel/mpi-ch/work/mpich-3.2.1/src/mpi/romio/include' 'CXX=c++' 'CXXFLAGS=-O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/X11R7/include -I/usr/include  -O2' 'FC=g77' 'F77=g77' 'FFLAGS=-O ' 'MPLLIBNAME=mpl' 'PKG_CONFIG=' --cache-file=/dev/null --srcdir=.
configure: WARNING: unrecognized options: --with-hwloc-prefix, --with-openpa-prefix, --with-pm, --with-thread-package, --enable-wrapper-rpath, --enable-fortran
checking for a BSD-compatible install... /usr/bin/install -c -o pbulk -g users
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... mkdir -p
checking for gawk... /usr/bin/awk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for style of include used by make... GNU
checking for armv7--netbsdelf-eabihf-icc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking for armv7--netbsdelf-eabihf-ar... ar
checking the archiver (ar) interface... ar
checking build system type... armv7--netbsdelf-eabihf
checking host system type... armv7--netbsdelf-eabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/egrep
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld
checking if the linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... (cached) 262144
checking how to convert armv7--netbsdelf-eabihf file names to armv7--netbsdelf-eabihf format... func_convert_file_noop
checking how to convert armv7--netbsdelf-eabihf file names to toolchain format... func_convert_file_noop
checking for /scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld option to reload object files... -r
checking for armv7--netbsdelf-eabihf-objdump... no
checking for objdump... objdump
checking how to recognize dependent libraries... match_pattern /lib[^/]+(\.so|_pic\.a)$
checking for armv7--netbsdelf-eabihf-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for armv7--netbsdelf-eabihf-ar... (cached) ar
checking for archiver @FILE support... @
checking for armv7--netbsdelf-eabihf-strip... no
checking for strip... strip
checking for armv7--netbsdelf-eabihf-ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for armv7--netbsdelf-eabihf-mt... no
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... rm: conftest*: No such file or directory
yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/scratch/work/parallel/mpi-ch/work/.cwrapper/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... rm: conftest*: No such file or directory
no
checking dynamic linker characteristics... NetBSD ld.elf_so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether make supports nested variables... (cached) yes
checking for an ANSI C-conforming const... yes
checking for C/C++ restrict keyword... __restrict
checking for inline... inline
checking for variable argument list macro functionality... yes
checking for gcov... gcov
checking whether the compiler supports __typeof(variable)... yes
checking stdio.h usability... yes
checking stdio.h presence... yes
checking for stdio.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking ctype.h usability... yes
checking ctype.h presence... yes
checking for ctype.h... yes
checking search.h usability... yes
checking search.h presence... yes
checking for search.h... yes
checking for sys/types.h... (cached) yes
checking sys/uio.h usability... yes
checking sys/uio.h presence... yes
checking for sys/uio.h... yes
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking valgrind.h usability... no
checking valgrind.h presence... no
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checking memcheck.h usability... no
checking memcheck.h presence... no
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checking valgrind/valgrind.h presence... no
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checking valgrind/memcheck.h usability... no
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checking helgrind.h usability... no
checking helgrind.h presence... no
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checking drd.h usability... no
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checking valgrind/drd.h presence... no
checking for valgrind/drd.h... no
checking whether the valgrind headers are broken or too old... yes
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checking whether strdup needs a declaration... no
checking for snprintf... yes
checking whether snprintf needs a declaration... no
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checking whether strncmp needs a declaration... no
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checking whether putenv needs a declaration... no
checking for strerror... yes
checking whether strerror needs a declaration... no
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating localdefs
config.status: creating include/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
rm: libtoolT: No such file or directory
config.status: executing include/mplconfig.h commands
config.status: creating include/mplconfig.h - prefix MPL for include/config.h defines
configure: WARNING: unrecognized options: --with-hwloc-prefix, --with-openpa-prefix, --with-pm, --with-thread-package, --enable-wrapper-rpath, --enable-fortran
configure: ===== done with mpl configure =====
configure: sourcing mpl/localdefs
checking for doxygen... no
checking for gcov... gcov
checking for ANSI C header files... (cached) yes
checking for unistd.h... (cached) yes
checking for strings.h... (cached) yes
checking for sys/types.h... (cached) yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
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checking sched.h usability... yes
checking sched.h presence... yes
checking for sched.h... yes
checking for sys/stat.h... (cached) yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking netinet/tcp.h usability... yes
checking netinet/tcp.h presence... yes
checking for netinet/tcp.h... yes
checking sys/un.h usability... yes
checking sys/un.h presence... yes
checking for sys/un.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking time.h usability... yes
checking time.h presence... yes
checking for time.h... yes
checking ifaddrs.h usability... yes
checking ifaddrs.h presence... yes
checking for ifaddrs.h... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking poll.h usability... yes
checking poll.h presence... yes
checking for poll.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking winsock2.h usability... no
checking winsock2.h presence... no
checking for winsock2.h... no
checking windows.h usability... no
checking windows.h presence... no
checking for windows.h... no
checking for library containing socket... none required
checking for library containing gethostbyname... none required
checking for library containing hstrerror... none required
checking for gettimeofday... yes
checking for time... yes
checking for strdup... yes
checking for sigaction... yes
checking for signal... yes
checking for usleep... yes
checking for alloca... yes
checking for unsetenv... yes
checking for strerror... yes
checking for strsignal... yes
checking for stat... yes
checking for fcntl... yes
checking for alarm... yes
checking for isatty... yes
checking for inet_ntop... yes
checking for getpgid... yes
checking for setsid... yes
checking for killpg... yes
checking for hstrerror... yes
checking whether hstrerror needs a declaration... no
checking whether gettimeofday needs a declaration... no
checking whether getpgid needs a declaration... no
checking whether killpg needs a declaration... no
checking for environ in unistd.h... no
checking for manually declared extern environ... yes
checking bootstrap server... user,ssh,rsh,fork,slurm,ll,lsf,sge,pbs,cobalt,manual,persist
checking tm.h usability... no
checking tm.h presence... no
checking for tm.h... no
checking for tm_init in -ltorque... no
checking process manager... pmiserv
checking user interface... mpich
checking desired processor topology libraries... hwloc
checking hwloc.h usability... yes
checking hwloc.h presence... yes
checking for hwloc.h... yes
checking for hwloc_topology_set_pid in -lhwloc... yes
checking if non-embedded hwloc works... yes
checking available processor topology libraries... hwloc
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking for pthread_key_create in -lpthread... yes
checking checkpointing library... blcr
checking libcr.h usability... no
checking libcr.h presence... no
checking for libcr.h... no
checking for cr_init in -lcr... no
checking demux engine... poll,select,port
checking for poll... yes
checking for select... yes
checking debugging support... none
checking error checking... yes
checking warnings... no
checking profiling... yes
checking for strsignal... (cached) yes
checking whether strsignal needs a declaration... no
checking for sigaction... (cached) yes
checking for signal... (cached) yes
checking for sigset... yes
checking for struct sigaction and sa_handler... yes
checking for gethostname... yes
checking whether gethostname needs a declaration... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating tools/bootstrap/src/bsci_init.c
config.status: creating hydra-doxygen.cfg
config.status: creating include/hydra_config.h
config.status: executing depfiles commands
config.status: executing libtool commands
rm: libtoolT: No such file or directory
configure: WARNING: unrecognized options: --with-openpa-prefix, --with-pm, --with-thread-package, --enable-wrapper-rpath, --enable-fortran
configure: ===== done with src/pm/hydra configure =====
checking size of OPA_ptr_t... 4
configure: WARNING: Could not define Fortran MPI datatypes for C
checking the sizeof MPI_Offset... 8
checking for size of MPI_Status... 20
configure: WARNING: The ch3 device did not set the maximum size of an error string, 512 being used.
configure: creating ./config.lt
config.lt: creating libtool
rm: libtoolT: No such file or directory
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating src/mpid/ch3/channels/nemesis/include/mpid_nem_net_module_defs.h
config.status: creating src/mpid/ch3/channels/nemesis/src/mpid_nem_net_array.c
config.status: creating Makefile
config.status: creating examples/Makefile
config.status: creating test/Makefile
config.status: creating test/commands/Makefile
config.status: creating src/include/mpichinfo.h
config.status: creating mpich-doxygen
config.status: creating src/include/glue_romio.h
config.status: creating src/binding/cxx/mpicxx.h
config.status: creating src/binding/fortran/mpif_h/mpif.h
config.status: creating src/binding/fortran/mpif_h/setbotf.f
config.status: creating src/binding/fortran/mpif_h/setbot.c
config.status: creating src/binding/fortran/use_mpi/mpi_sizeofs.f90
config.status: creating src/binding/fortran/use_mpi/mpi_base.f90
config.status: creating src/binding/fortran/use_mpi/mpi_constants.f90
config.status: creating src/binding/fortran/use_mpi_f08/mpi_f08_compile_constants.f90
config.status: creating src/binding/fortran/use_mpi_f08/mpi_c_interface_types.f90
config.status: creating src/packaging/pkgconfig/mpich.pc
config.status: creating src/packaging/envmods/mpich.module
config.status: WARNING:  'src/packaging/envmods/mpich.module.in' seems to ignore the --datarootdir setting
config.status: creating src/env/mpixxx_opts.conf
config.status: creating src/env/mpicc.sh
config.status: creating src/env/mpicc.bash
config.status: creating src/env/mpicxx.sh
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config.status: creating src/env/mpif77.sh
config.status: creating src/env/mpif77.bash
config.status: creating src/env/mpifort.sh
config.status: creating src/env/mpifort.bash
config.status: creating src/env/parkill
config.status: creating src/util/dbg/getfuncstack
config.status: creating src/util/timers/mpiu_timer.h
config.status: creating src/include/mpi.h
config.status: creating doc/design/Makefile
config.status: creating doc/installguide/Makefile
config.status: creating doc/logging/Makefile
config.status: creating doc/refman/Makefile
config.status: creating doc/userguide/Makefile
config.status: creating test/commands/cmdtests
config.status: creating src/include/mpichconf.h
config.status: executing depfiles commands
config.status: executing libtool commands
rm: libtoolT: No such file or directory
config.status: executing default-1 commands
config.status: executing default-2 commands
config.status: executing default-3 commands
config.status: executing default-4 commands
config.status: executing default-5 commands
=== configuring in test/mpi (/scratch/work/parallel/mpi-ch/work/mpich-3.2.1/test/mpi)
configure: running /bin/sh ./configure --disable-option-checking '--prefix=/usr/pkg'  '--datadir=/usr/pkg/share/mpich' '--docdir=/usr/pkg/share/doc/mpich' '--htmldir=/usr/pkg/share/doc/mpich/html' '--sysconfdir=/usr/pkg/etc/mpich' '--with-hwloc-prefix=/usr/pkg' '--with-openpa-prefix=/usr/pkg' '--with-pm=hydra:gforker' '--with-thread-package=posix' '--enable-wrapper-rpath' '--enable-fortran=no' '--x-includes=/usr/X11R7/include' '--x-libraries=/usr/X11R7/lib' '--build=armv7--netbsdelf-eabihf' '--host=armv7--netbsdelf-eabihf' '--mandir=/usr/pkg/man' '--enable-option-checking=yes' 'build_alias=armv7--netbsdelf-eabihf' 'host_alias=armv7--netbsdelf-eabihf' 'CC=gcc' 'CFLAGS=-O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/X11R7/include -I/usr/include' 'LDFLAGS=-lm -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/X11R7/lib -Wl,-R/usr/X11R7/lib -L/usr/lib -Wl,-R/usr/lib' 'LIBS=' 'CPPFLAGS=-I/usr/pkg/include -I/usr/X11R7/include -I/usr/include' 'CXX=c++' 'CXXFLAGS=-O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/X11R7/include -I/usr/include' 'FC=g77' 'F77=g77' 'FFLAGS=-O' --cache-file=/dev/null --srcdir=.
configure: WARNING: unrecognized options: --with-hwloc-prefix, --with-openpa-prefix, --with-thread-package, --enable-wrapper-rpath
RUNNING CONFIGURE FOR MPI TESTS
checking for a BSD-compatible install... /usr/bin/install -c -o pbulk -g users
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... mkdir -p
checking for gawk... /usr/bin/awk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... yes
checking whether make supports nested variables... (cached) yes
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... yes
checking for style of include used by make... GNU
checking for armv7--netbsdelf-eabihf-icc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking whether long double is supported... yes
checking whether long long is supported... yes
checking for an ANSI C-conforming const... yes
checking for C/C++ restrict keyword... __restrict
checking for armv7--netbsdelf-eabihf-ranlib... ranlib
checking for armv7--netbsdelf-eabihf-ar... ar
checking the archiver (ar) interface... ar
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for fgrep... /usr/bin/grep -F
checking how to run the C preprocessor... gcc -E
checking for egrep... (cached) /usr/bin/egrep
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking for int8_t... yes
checking for int16_t... yes
checking for int32_t... yes
checking for int64_t... yes
checking for uint8_t... yes
checking for uint16_t... yes
checking for uint32_t... yes
checking for uint64_t... yes
checking for _Bool... yes
checking for float _Complex... yes
checking for double _Complex... yes
checking for long double _Complex... yes
checking size of void *... 4
checking for library containing socket... none required
checking for library containing gethostbyname... none required
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking for library containing pthread_create... -lpthread
checking for library containing pthread_barrier_init... none required
checking for pthread_create... yes
checking for pthread_yield... no
checking for pthread_barrier_init... yes
checking for pthread_barrier_wait... yes
checking whether struct hostent contains h_addr_list... yes
checking for getrusage... yes
checking for armv7--netbsdelf-eabihf-ifort... g77
checking whether we are using the GNU Fortran 77 compiler... no
checking whether g77 accepts -g... no
configure: WARNING: Selecting integer*8 as the Fortran type for MPI_Offset
configure: WARNING: Selecting integer as the Fortran type for MPI_Aint
checking for armv7--netbsdelf-eabihf-ifort... g77
checking whether we are using the GNU Fortran compiler... no
checking whether g77 accepts -g... no
checking whether we are using the GNU C++ compiler... yes
checking whether c++ accepts -g... yes
checking dependency style of c++... gcc3
checking whether <iostream> available... yes
checking whether the compiler implements namespaces... yes
checking whether the compiler implements the namespace std... yes
checking whether MPI_2DOUBLE_COMPLEX is available... no
checking whether MPI_2COMPLEX is available... no
checking size of void *... (cached) 4
checking size of int... 4
checking size of long... 4
checking size of long long... 8
checking size of short... 2
checking for C integer type of address size... int
checking for perl... /usr/pkg/bin/perl
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating maint/testmerge
config.status: creating runtests
config.status: creating checktests
config.status: creating Makefile
config.status: creating basic/Makefile
config.status: creating attr/Makefile
config.status: creating util/Makefile
config.status: creating coll/Makefile
config.status: creating coll/testlist
config.status: creating comm/Makefile
config.status: creating datatype/Makefile
config.status: creating datatype/testlist
config.status: creating errhan/Makefile
config.status: creating group/Makefile
config.status: creating info/Makefile
config.status: creating init/Makefile
config.status: creating pt2pt/Makefile
config.status: creating mpi_t/Makefile
config.status: creating rma/Makefile
config.status: creating rma/testlist
config.status: creating spawn/Makefile
config.status: creating spawn/testlist
config.status: creating topo/Makefile
config.status: creating io/Makefile
config.status: creating io/testlist
config.status: creating f77/Makefile
config.status: creating f77/attr/Makefile
config.status: creating f77/attr/attraints.h
config.status: creating f77/pt2pt/attr1aints.h
config.status: creating f77/ext/add1size.h
config.status: creating f77/datatype/Makefile
config.status: creating f77/datatype/typeaints.h
config.status: creating f77/util/Makefile
config.status: creating f77/coll/Makefile
config.status: creating f77/comm/Makefile
config.status: creating f77/topo/Makefile
config.status: creating f77/init/Makefile
config.status: creating f77/rma/addsize.h
config.status: creating f77/pt2pt/Makefile
config.status: creating f77/info/Makefile
config.status: creating f77/spawn/Makefile
config.status: creating f77/spawn/testlist
config.status: creating f77/spawn/type1aint.h
config.status: creating f77/rma/Makefile
config.status: creating f77/ext/Makefile
config.status: creating f77/ext/testlist
config.status: creating f77/io/Makefile
config.status: creating f77/io/iooffset.h
config.status: creating f77/io/iodisp.h
config.status: creating f77/io/ioaint.h
config.status: creating f77/io/testlist
config.status: creating f77/profile/Makefile
config.status: creating f90/Makefile
config.status: creating f90/attr/Makefile
config.status: creating f90/datatype/Makefile
config.status: creating f90/f90types/Makefile
config.status: creating f90/util/Makefile
config.status: creating f90/coll/Makefile
config.status: creating f90/comm/Makefile
config.status: creating f90/topo/Makefile
config.status: creating f90/init/Makefile
config.status: creating f90/pt2pt/Makefile
config.status: creating f90/rma/Makefile
config.status: creating f90/info/Makefile
config.status: creating f90/spawn/Makefile
config.status: creating f90/spawn/testlist
config.status: creating f90/timer/Makefile
config.status: creating f90/ext/Makefile
config.status: creating f90/ext/testlist
config.status: creating f90/io/Makefile
config.status: creating f90/io/testlist
config.status: creating f90/misc/Makefile
config.status: creating f90/profile/Makefile
config.status: creating f08/Makefile
config.status: creating f08/attr/Makefile
config.status: creating f08/datatype/Makefile
config.status: creating f08/util/Makefile
config.status: creating f08/coll/Makefile
config.status: creating f08/comm/Makefile
config.status: creating f08/pt2pt/Makefile
config.status: creating f08/rma/Makefile
config.status: creating f08/subarray/Makefile
config.status: creating f08/topo/Makefile
config.status: creating f08/io/Makefile
config.status: creating f08/io/testlist
config.status: creating f08/init/Makefile
config.status: creating f08/info/Makefile
config.status: creating f08/spawn/Makefile
config.status: creating f08/spawn/testlist
config.status: creating f08/timer/Makefile
config.status: creating f08/ext/Makefile
config.status: creating f08/misc/Makefile
config.status: creating f08/profile/Makefile
config.status: creating cxx/Makefile
config.status: creating cxx/util/Makefile
config.status: creating cxx/attr/Makefile
config.status: creating cxx/pt2pt/Makefile
config.status: creating cxx/comm/Makefile
config.status: creating cxx/coll/Makefile
config.status: creating cxx/errhan/Makefile
config.status: creating cxx/info/Makefile
config.status: creating cxx/datatype/Makefile
config.status: creating cxx/io/Makefile
config.status: creating cxx/init/Makefile
config.status: creating cxx/rma/Makefile
config.status: creating cxx/spawn/Makefile
config.status: creating cxx/spawn/testlist
config.status: creating cxx/topo/Makefile
config.status: creating threads/Makefile
config.status: creating threads/pt2pt/Makefile
config.status: creating threads/util/Makefile
config.status: creating threads/comm/Makefile
config.status: creating threads/comm/testlist
config.status: creating threads/init/Makefile
config.status: creating threads/mpi_t/Makefile
config.status: creating threads/spawn/Makefile
config.status: creating threads/rma/Makefile
config.status: creating threads/coll/Makefile
config.status: creating threads/coll/testlist
config.status: creating errors/Makefile
config.status: creating errors/attr/Makefile
config.status: creating errors/basic/Makefile
config.status: creating errors/coll/Makefile
config.status: creating errors/comm/Makefile
config.status: creating errors/datatype/Makefile
config.status: creating errors/faults/Makefile
config.status: creating errors/group/Makefile
config.status: creating errors/pt2pt/Makefile
config.status: creating errors/rma/Makefile
config.status: creating errors/spawn/Makefile
config.status: creating errors/spawn/testlist
config.status: creating errors/topo/Makefile
config.status: creating errors/io/Makefile
config.status: creating errors/cxx/Makefile
config.status: creating errors/cxx/errhan/Makefile
config.status: creating errors/cxx/io/Makefile
config.status: creating errors/f77/Makefile
config.status: creating errors/f77/io/Makefile
config.status: creating errors/f77/io/addsize.h
config.status: creating errors/f77/io/iooffset.h
config.status: creating errors/f90/Makefile
config.status: creating errors/f90/io/Makefile
config.status: creating errors/f08/Makefile
config.status: creating errors/f08/io/Makefile
config.status: creating ckpoint/Makefile
config.status: creating ft/Makefile
config.status: creating manual/Makefile
config.status: creating manual/manyconnect
config.status: creating manual/mpi_t/Makefile
config.status: creating perf/Makefile
config.status: creating testlist
config.status: creating cxx/testlist
config.status: creating cxx/topo/testlist
config.status: creating f77/testlist
config.status: creating f90/testlist
config.status: creating threads/testlist
config.status: creating errors/testlist
config.status: creating errors/cxx/testlist
config.status: creating errors/f77/testlist
config.status: creating errors/f90/testlist
config.status: creating impls/testlist
config.status: creating f77/rma/testlist
config.status: creating f90/rma/testlist
config.status: creating f08/rma/testlist
config.status: creating impls/Makefile
config.status: creating impls/hydra/Makefile
config.status: creating impls/hydra/proc_binding.sh
config.status: creating impls/mpich/Makefile
config.status: creating impls/mpich/testlist
config.status: creating impls/mpich/mpi_t/Makefile
config.status: creating include/mpitestconf.h
config.status: executing depfiles commands
config.status: executing default-1 commands
config.status: executing default-2 commands
config.status: executing default-3 commands
config.status: executing default-4 commands
configure: WARNING: unrecognized options: --with-hwloc-prefix, --with-openpa-prefix, --with-thread-package, --enable-wrapper-rpath
configure: WARNING: unrecognized options: --with-hwloc-prefix
Configuration completed.
=> Modifying libtool scripts to use pkgsrc libtool
=> Modifying libtool scripts to use pkgsrc depcomp
WARNING: *** Please consider adding fortran to USE_LANGUAGES in the package Makefile.